2019 Exercise 2.1

Lecture 2.2

Using MCMCglmm in R to estimate inheritance parameters

by Patrick Carter

Before our session on Tuesday please make sure you have installed the following R packages: ggplot2, MasterBayes, MCMCglmm, Plyr


Before Class Tuesday please download the following 4 files; note that Model 101 output and Model 1201 output can only be read and visualized from within the R environment.

R MCMCglmm script

ASCCI data set to use with above R script

Model 101 output (Phenotype 1 Additive and Fixed nitt =1,000,000)

Model 1201 output (Phenotypes 1 and 2 Additive and Fixed nitt = 2,000,000)


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